Ag3.1: Anopheles gambiae data resource

Project: Anopheles gambiae genomic surveillance project

Released on 17 Nov 2023

The MalariaGEN Vector Observatory Anopheles gambiae data resource version 3.1 (Ag3.1) contains single nucleotide polymorphism (SNP) calls, copy number variant (CNV) calls and SNP haplotypes from whole-genome sequencing of mosquitoes collected in Mali from 2012 to 2015. Ag3.1 contains 647 whole genome sequences from mosquito samples collected in two locations in Mali. Mosquito species are mostly An. coluzzii, with a smaller number of An. arabiensis and An. gambiae.

Ag3.1 Sample Locations

Mosquitoes were collected in several villages in the Mali Sahel from 2012 to 2015, along two transects centred on the village of Thierola and including Niono, a region of irrigated rice cultivation.

Ag3.1 Terms of Use

Please note that these data are subject to a publication embargo, which expires two years from the date of this data release. Full terms of use can be found here. If you have any questions about the terms of use, please email data [at] (data [at] sends e-mail)).

Ag3.1 Data Access

Please visit the release page on the vector data guide to find out more about how to access the data.