Ag3.5: Anopheles gambiae data resource

Project: Anopheles gambiae genomic surveillance project

Released on 17 Nov 2023

The MalariaGEN Vector Observatory Anopheles gambiae data resource version 3.5 (Ag3.5) contains single nucleotide polymorphism (SNP) calls, copy number variant (CNV) calls and SNP haplotypes from whole-genome sequencing of mosquitoes collected in the Democratic Republic of Congo (673 samples), Ethiopia (85 samples) and The Gambia (382 samples) from 2001 to 2020. Ag3.5 contains 1140 whole genome sequences from An. gambiae, An. coluzzii, and An. arabiensis species.

Ag3.5 Contributing Studies

1264 - PAMCA Anopheles genomics programme - First investigation of genetic diversity in malaria vectors in the Democratic Republic of Congo and the implications for the spread of insecticide resistance

1270 - Pan-African Malaria Genetic Epidemiology Network (PAMGEN) Anopheles gambiae samples

1272 - PAMCA Anopheles genomics programme - Understanding genomic diversity and heterogeneity of insecticide resistance phenotypes in Anopheles gambiae s.l. in The Gambia

Ag3.5 Sample Locations

Mosquitoes were collected from 36 locations across the Democratic Republic of Congo (16 locations), The Gambia (18 locations) and Ethiopia (1 location).

Ag3.5 sample locations

Ag3.5 Terms of Use

Please note that these data are subject to a publication embargo, which expires two years from the date of this data release. Full terms of use can be found here. If you have any questions about the terms of use, please email data [at] malariagen.net (data [at] malariagen.net(link sends e-mail)).

Ag3.5 Data Access

Please visit the release page on the vector data guide to find out more about how to access the data.