Ag3.6: Anopheles gambiae data resource

Project: Anopheles gambiae genomic surveillance project

Released on 17 Nov 2023

The MalariaGEN Vector Observatory Anopheles gambiae data resource version 3.6 (Ag3.6) contains single nucleotide polymorphism (SNP) calls, copy number variant (CNV) calls and SNP haplotypes from whole-genome sequencing of mosquitoes collected in Cote d'Ivôire (379 samples), South Africa (341 samples), Uganda (483 samples) and Zambia (201 samples) from 2017 to 2021. Ag3.6 contains 1404 whole genome sequences from An. coluzzii, An. gambiae and An. arabiensis species.

Ag3.6 Contributing Studies

1273 - Seasonality and impact of vector control interventions on population genetics of Anopheles funestus and Anopheles gambiae malaria vectors in Zambia

1279 - Strengthening malaria vector surveillance in Cote d’Ivoire: An investigation into genetic diversity and gene flow data gap in insecticide resistant Anopheles gambiae

1280 - Genetic structuring in the major malaria vector Anopheles arabiensis and implication on vector control in South Africa

1288 - LLIN Evaluation in Uganda Project (LLINEUP)

Ag3.6 Sample Locations

Mosquitoes were collected from 16 locations across Cote d'Ivôire (4 locations), South Africa (1 location), Uganda (9 locations) and Zambia (2 locations).

Ag3.6 sample locations

Ag3.6 Terms of Use

Please note that these data are subject to a publication embargo, which expires two years from the date of this data release. Full terms of use can be found here. If you have any questions about the terms of use, please email data [at] malariagen.net (data [at] malariagen.net(link sends e-mail)).

13 Oct 2023

Ag3.6 Data Access

Please visit the release page on the vector data guide to find out more about how to access the data.