The latest data provides a list of current MalariaGEN data releases.
The data archive maintains a record of data releases that have been superseded by newer releases.
On occasion, we also release specific data used in published analyses. To access these data, visit the resource page for the relevant paper, in our Publications section.
EGA Study ID: EGAS00001001311
Three populations: Gambia (2,786 controls; 2,807 cases; 1 parents); Kenya (1,708 controls; 1,944 cases; 180 parents; 33 other); Malawi (1,498 controls; 1,590 cases)
Sample set: 2,512 field isolates; 5 lab clonal samples; 96 crosses samples; 27 mixed lab strains
Sample information, accession numbers, analysis BAMs, and a set of de novo genotype calls, both indels and SNPs, built using a pipeline based on GATK best practices
Sample information for 3,411 samples from 23 countries
Genotypes for 3,394 samples from 22 countries
Sample set: 3,488 samples from 23 countries
High-quality SNPs: 900,000+