Data exploration and analysis tools

Data tools

MalariaGEN brings together and integrates genomic data from different labs and field studies, which increases the scale and value of the data resources. This reference data resource offers the potential for global surveillance of species that transmit malaria.

To manage the complexity of large-scale data, MalariaGEN has developed informatics systems and data application tools that help clinicians and scientists analyse and share data.

While primarily developed for MalariaGEN specific use cases, our open source software for analysis of large-scale scientific data has potential for use by the wider scientific community. 

P. falciparum - Pf7 web application 
Visualise markers of drug resistance across 16,000 worldwide samples

Mosquito - Vector Data User Guide
A guide to interact with the vector data using Jupyter notebooks