The MalariaGEN Vector Observatory Anopheles gambiae data resource version 3.5 (Ag3.5) contains single nucleotide polymorphism (SNP) calls, copy number variant (CNV) calls and SNP haplotypes from whole-genome sequencing of mosquitoes collected in the Democratic Republic of Congo (673 samples), Ethiopia (85 samples) and The Gambia (382 samples) from 2001 to 2020. Ag3.5 contains 1140 whole genome sequences from An. gambiae, An. coluzzii, and An. arabiensis species.
Ag3.5 Contributing Studies
1264 – PAMCA Anopheles genomics programme – First investigation of genetic diversity in malaria vectors in the Democratic Republic of Congo and the implications for the spread of insecticide resistance
Data from this project will be made publicly available before journal publication. Unless otherwise stated, analyses of project data are ongoing and publications are in preparation by project partners, and it is not permitted to use project data for publication (including any type of communication with the general public) without prior permission from the originating partner studies.
Ag3.5 Data Access
Please visit the release page on the vector data guide to find out more about how to access the data.
Ag3.5 Sample Locations
Mosquitoes were collected from 36 locations across the Democratic Republic of Congo (16 locations), The Gambia (18 locations) and Ethiopia (1 location).