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Gambian Genome Variation Project - Open Access Data

Released on 19 Jul 2019.

Human

The Gambian Genome Variation Project (GGVP) is a collaboration of the MRC Unit in The Gambia, the Wellcome Sanger Institute, the MRC Centre for Genomics and Global Health at Oxford University, and the MalariaGEN Resource Centre. The purpose of the project was to support the discovery and understanding of genetic variants that influence human disease.

Please see the 1000 Genomes FTP site for a full description of the data including terms of use.

Data sets

Sequence read data for Fula individuals

ENA Study Accession: ERP001420

Method: Illumina HiSeq Sequencing

Data is hosted on the European Nucleotide Archive.

Go to ENA

Sequence read data for Jola individuals

ENA Study Accession: ERP001781

Method: Illumina HiSeq Sequencing

Data is hosted on the European Nucleotide Archive.

Go to ENA

Sequence read data for Mandinka individuals

ENA Study Accession: ERP002385

Method: Illumina HiSeq Sequencing

Data is hosted on the European Nucleotide Archive.

Go to ENA

Sequence read data for Woloff individuals

ENA Study Accession: ERP002150

Method: Illumina HiSeq Sequencing

Data is hosted on the European Nucleotide Archive.

Go to ENA

GGVP dataset metadata and genome-wide genotype data

The data package hosted on the 1000 Genomes FTP site includes a list of family relationships across the GGVP data, and information on the relationship between genotyped and sequenced indivudals.

Go to 1000 Genomes FTP

Go to 1000 Genomes FTP

Open access

Our approach to sharing data

Data package contact

Citations

Please see the README on the 1000 Genomes FTP for citation information.