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Ag1000G phase 1 AR3.1 data release
Project: Ag1000G

Released on 21 Dec 2016.


This release adds further data on the Ag1000G phase 1 cohort, comprising 845 mosquito specimens in total. Included in the release are improved haplotype data for the 765 wild-caught specimens (now including the X chromosome) and results from various population genomic analyses and SNP validation experiments.

See also the Ag1000G phase 1 AR3 data release. All mosquitoes were sequenced by the Wellcome Trust Sanger Institute’s Malaria programme. Any use of Project data is subject to the Terms of Use.

Data sets


This data release includes haplotype data available as either VCF, HDF5 or Zarr format files, and other associated data files.

All of the data files included in this release can be downloaded from the Wellcome Trust Sanger Institute public FTP site.

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Go to FTP

Go to FTP

Open access


Our approach to sharing data

Data package contact


To cite these data directly, please use the following citation format:

The Anopheles gambiae 1000 Genomes Consortium (2016): Ag1000G phase 1 AR3.1 data release. MalariaGEN.